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  • Negative cofitness for PP_0077 from Pseudomonas putida KT2440

    choline-sulfatase
    SEED: Choline-sulfatase (EC 3.1.6.6)
    KEGG: choline-sulfatase

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 -0.25
    2 PP_1623 RNA polymerase, sigma S (sigma 38) factor -0.24
    3 PP_2144 Transcriptional regulator, TetR family -0.23
    4 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit -0.23
    5 PP_1325 putative lipoprotein -0.23
    6 PP_0123 DNA polymerase I, 5 -0.22
    7 PP_4375 flagellar chaperone, inhibits premature FliC assembly -0.22
    8 PP_4343 Flagellar biosynthesis protein FlhF -0.22
    9 PP_1224 periplasmic subunit of the TolQRA transport system -0.21
    10 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I -0.21
    11 PP_0397 protein kinase -0.21
    12 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase -0.21
    13 PP_5726 conserved protein of unknown function -0.20
    14 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein -0.20
    15 PP_4803 D-alanyl-D-alanine carboxypeptidase -0.20
    16 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase -0.20
    17 PP_5064 choline dehydrogenase -0.20
    18 PP_0395 putative type IV piliation protein -0.20
    19 PP_3907 conserved protein of unknown function -0.20
    20 PP_4900 epoxyqueuosine reductase -0.19

    Or look for positive cofitness