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  • Negative cofitness for PP_0051 from Pseudomonas putida KT2440

    putative sigma-54 dependent transcriptional regulator
    SEED: Sigma-54 dependent transcriptional regulator

    Computing cofitness values with 989 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_3065 Pyocin R2_PP, tail formation -0.23
    2 PP_0506 putative ABC efflux transporter, permease protein -0.22
    3 PP_2537 conserved protein of unknown function -0.21
    4 PP_4265 DNA-binding transcriptional dual regulator -0.21
    5 PP_5027 D-tyrosyl-tRNA(Tyr) deacylase -0.21
    6 PP_1173 porin-like protein -0.20
    7 PP_0174 conserved protein of unknown function -0.20
    8 PP_0173 putative transcriptional factor-related protein -0.20
    9 PP_2060 DNA-binding transcriptional dual regulator - SoxR-reversible one-electron oxidation of its [2Fe-2S] cluster, NADPH-dependent -0.19
    10 PP_1002 arginine/ornithine antiporter -0.19
    11 PP_2413 GGDEF family protein -0.19
    12 PP_4346 D-alanine--D-alanine ligase A -0.19
    13 PP_4652 putative Membrane protein -0.19
    14 PP_1501 conserved protein of unknown function -0.18
    15 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding -0.18
    16 PP_4246 Periplasmic binding protein -0.18
    17 PP_4242 conserved protein of unknown function with Rhs repeat-associated core domain -0.18
    18 PP_3762 Response regulator -0.18
    19 PP_1011 glucokinase -0.18
    20 PP_2637 endo-1,4-D-glucanase subunit of cellulose synthase -0.18

    Or look for positive cofitness