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  • Negative cofitness for PP_0049 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Glycosaminoglycan attachment site

    Computing cofitness values with 1005 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PP_1224 periplasmic subunit of the TolQRA transport system -0.32
    2 PP_0496 Sodium/alanine symporter -0.31
    3 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) -0.31
    4 PP_1325 putative lipoprotein -0.29
    5 PP_4008 ATP-dependent serine protease -0.28
    6 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 -0.28
    7 PP_4946 sodium/L-proline transporter -0.27
    8 PP_4286 allantoinase -0.27
    9 PP_4058 1,4-alpha-glucan branching enzyme -0.27
    10 PP_0995 conserved membrane protein of unknown function -0.27
    11 PP_1623 RNA polymerase, sigma S (sigma 38) factor -0.26
    12 PP_3484 Response regulator receiver protein -0.26
    13 PP_4900 epoxyqueuosine reductase -0.26
    14 PP_5502 ribosome modulation factor -0.26
    15 PP_5337 LysR family transcriptional regulator -0.26
    16 PP_0951 Ribosome hibernation promoting factor -0.26
    17 PP_4803 D-alanyl-D-alanine carboxypeptidase -0.26
    18 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase -0.26
    19 PP_4004 DNA translocase FtsK -0.26
    20 PP_1318 Cytochrome b -0.25

    Or look for positive cofitness