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  • Negative cofitness for LU632_RS03210 from Erwinia tracheiphila SCR3

    EscI/YscI/HrpB family type III secretion system inner rod protein
    SEED: type III secretion protein HrpB(Pto)

    Computing cofitness values with 53 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 LU632_RS21355 Do family serine endopeptidase -0.52
    2 LU632_RS03295 aminoimidazole riboside kinase -0.50
    3 LU632_RS03325 hypothetical protein -0.49
    4 LU632_RS26165 PD-(D/E)XK nuclease-like domain-containing protein -0.48
    5 LU632_RS13255 proQ RNA chaperone ProQ -0.46
    6 LU632_RS25235 gspE type II secretion system ATPase GspE -0.46
    7 LU632_RS15385 rnc ribonuclease III -0.46
    8 LU632_RS03330 LacI family DNA-binding transcriptional regulator -0.46
    9 LU632_RS19015 cspA RNA chaperone/antiterminator CspA -0.46
    10 LU632_RS08170 rcsC two-component system sensor histidine kinase RcsC -0.45
    11 LU632_RS03780 tssK type VI secretion system baseplate subunit TssK -0.45
    12 LU632_RS15465 type VI secretion system amidase effector protein Tae4 -0.45
    13 LU632_RS22720 SlyX family protein -0.45
    14 LU632_RS11855 DUF2778 domain-containing protein -0.44
    15 LU632_RS03785 DotU family type VI secretion system protein -0.44
    16 LU632_RS22050 YicC family protein -0.44
    17 LU632_RS20620 cpdA 3',5'-cyclic-AMP phosphodiesterase -0.44
    18 LU632_RS00625 MFS transporter -0.43
    19 LU632_RS19880 A24 family peptidase -0.43
    20 LU632_RS09735 hypothetical protein -0.43

    Or look for positive cofitness