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  • Negative cofitness for LRK53_RS16705 from Rhodanobacter sp000427505 FW510-R12

    pilus assembly protein PilM
    SEED: Type IV pilus biogenesis protein PilM
    KEGG: type IV pilus assembly protein PilM

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 LRK53_RS12015 hypothetical protein -0.56
    2 LRK53_RS01880 rhomboid family intramembrane serine protease -0.56
    3 LRK53_RS12010 bifunctional diguanylate cyclase/phosphodiesterase -0.49
    4 LRK53_RS01685 YceI family protein -0.49
    5 LRK53_RS11580 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase -0.47
    6 LRK53_RS17885 orotate phosphoribosyltransferase -0.45
    7 LRK53_RS06670 RIP metalloprotease RseP -0.45
    8 LRK53_RS03900 NAD(P)/FAD-dependent oxidoreductase -0.45
    9 LRK53_RS08355 tryptophan synthase subunit alpha -0.44
    10 LRK53_RS07080 M20 family metallopeptidase -0.43
    11 LRK53_RS14840 trypsin-like peptidase domain-containing protein -0.42
    12 LRK53_RS00080 acetate--CoA ligase -0.42
    13 LRK53_RS00400 amidohydrolase family protein -0.42
    14 LRK53_RS09385 hypothetical protein -0.41
    15 LRK53_RS19070 hypothetical protein -0.41
    16 LRK53_RS01830 hypothetical protein -0.41
    17 LRK53_RS08430 30S ribosomal protein THX -0.41
    18 LRK53_RS13905 PhzF family phenazine biosynthesis protein -0.40
    19 LRK53_RS10200 TraR/DksA C4-type zinc finger protein -0.40
    20 LRK53_RS11250 2OG-Fe(II) oxygenase -0.40

    Or look for positive cofitness