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  • Negative cofitness for LRK53_RS09080 from Rhodanobacter sp000427505 FW510-R12

    tRNA pseudouridine(55) synthase TruB
    SEED: tRNA pseudouridine synthase B (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase B

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 LRK53_RS12665 efflux transporter outer membrane subunit -0.58
    2 LRK53_RS01405 fimbrial biogenesis outer membrane usher protein -0.56
    3 LRK53_RS16960 2OG-Fe(II) oxygenase -0.55
    4 LRK53_RS18720 RES domain-containing protein -0.53
    5 LRK53_RS13550 PhoH family protein -0.52
    6 LRK53_RS02895 O-antigen ligase family protein -0.52
    7 LRK53_RS05465 hemin uptake protein HemP -0.51
    8 LRK53_RS08355 tryptophan synthase subunit alpha -0.51
    9 LRK53_RS02880 glycosyltransferase family 2 protein -0.51
    10 LRK53_RS01510 2Fe-2S iron-sulfur cluster-binding protein -0.51
    11 LRK53_RS02900 glycosyltransferase family 39 protein -0.51
    12 LRK53_RS02885 glycosyltransferase family 2 protein -0.49
    13 LRK53_RS09515 S46 family peptidase -0.48
    14 LRK53_RS00850 glycoside hydrolase family 3 C-terminal domain-containing protein -0.48
    15 LRK53_RS12670 efflux RND transporter periplasmic adaptor subunit -0.48
    16 LRK53_RS07165 PqiC family protein -0.47
    17 LRK53_RS00145 DJ-1/PfpI family protein -0.47
    18 LRK53_RS12325 aminopeptidase P family protein -0.47
    19 LRK53_RS03690 dihydroorotase -0.47
    20 LRK53_RS09385 hypothetical protein -0.47

    Or look for positive cofitness