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  • Negative cofitness for LRK53_RS04580 from Rhodanobacter sp000427505 FW510-R12

    sigma-70 family RNA polymerase sigma factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 LRK53_RS16730 nucleoside hydrolase -0.46
    2 LRK53_RS12365 patatin-like phospholipase family protein -0.46
    3 LRK53_RS05475 FAD-dependent oxidoreductase -0.45
    4 LRK53_RS15500 DUF5110 domain-containing protein -0.42
    5 LRK53_RS07120 DUF502 domain-containing protein -0.41
    6 LRK53_RS02640 type I-F CRISPR-associated endonuclease Cas1f -0.41
    7 LRK53_RS18950 hypothetical protein -0.40
    8 LRK53_RS02880 glycosyltransferase family 2 protein -0.39
    9 LRK53_RS05765 16S rRNA (uracil(1498)-N(3))-methyltransferase -0.39
    10 LRK53_RS07630 amidohydrolase -0.38
    11 LRK53_RS18690 hypothetical protein -0.37
    12 LRK53_RS01440 ATP-binding cassette domain-containing protein -0.36
    13 LRK53_RS13255 hypothetical protein -0.36
    14 LRK53_RS02610 type I-F CRISPR-associated protein Csy3 -0.36
    15 LRK53_RS05530 ABC transporter permease -0.36
    16 LRK53_RS13900 rhomboid family intramembrane serine protease -0.35
    17 LRK53_RS13465 DNA mismatch repair endonuclease MutL -0.34
    18 LRK53_RS02620 type I-F CRISPR-associated protein Csy1 -0.34
    19 LRK53_RS02970 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -0.33
    20 LRK53_RS14720 hypothetical protein -0.33

    Or look for positive cofitness