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  • Negative cofitness for LRK53_RS01375 from Rhodanobacter sp000427505 FW510-R12

    pseudouridine synthase
    SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase F

    Computing cofitness values with 77 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 LRK53_RS16720 citrate synthase -0.59
    2 LRK53_RS02000 DISARM system helicase DrmA -0.57
    3 LRK53_RS00960 hypothetical protein -0.55
    4 LRK53_RS18760 hypothetical protein -0.53
    5 LRK53_RS04670 shikimate kinase -0.52
    6 LRK53_RS13510 polynucleotide adenylyltransferase PcnB -0.50
    7 LRK53_RS01005 TIGR02391 family protein -0.50
    8 LRK53_RS05725 glutathione synthase -0.50
    9 LRK53_RS02285 oxygen-dependent coproporphyrinogen oxidase -0.50
    10 LRK53_RS10695 acyl-CoA dehydrogenase family protein -0.49
    11 LRK53_RS02225 hypothetical protein -0.49
    12 LRK53_RS15715 HPr(Ser) kinase/phosphatase -0.49
    13 LRK53_RS01125 sulfatase-like hydrolase/transferase -0.49
    14 LRK53_RS04075 pyruvate dehydrogenase (acetyl-transferring), homodimeric type -0.48
    15 LRK53_RS13325 DEAD/DEAH box helicase family protein -0.48
    16 LRK53_RS15180 chemotaxis protein -0.48
    17 LRK53_RS11725 hydrogenase 4 subunit F -0.48
    18 LRK53_RS09655 ribonuclease R -0.47
    19 LRK53_RS11460 4a-hydroxytetrahydrobiopterin dehydratase -0.46
    20 LRK53_RS18645 RHS repeat-associated core domain-containing protein -0.46

    Or look for positive cofitness