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  • Negative cofitness for GFF99 from Sphingobium sp. HT1-2

    23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190)
    SEED: 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-)
    KEGG: RNA methyltransferase, TrmA family

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1523 NADH dehydrogenase (EC 1.6.99.3) -0.82
    2 GFF881 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) -0.82
    3 GFF3723 Glucans biosynthesis glucosyltransferase H -0.81
    4 GFF2552 hypothetical protein -0.77
    5 GFF574 hypothetical protein -0.75
    6 GFF4717 Transcriptional regulator, AcrR family -0.74
    7 GFF2039 RNA polymerase ECF-type sigma factor -0.74
    8 GFF1331 hypothetical protein -0.73
    9 GFF1993 NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2) -0.72
    10 GFF5179 Ferrichrome-iron receptor -0.72
    11 GFF2812 2-keto-3-deoxy-L-fuconate dehydrogenase -0.72
    12 GFF5406 hypothetical protein -0.72
    13 GFF1839 Transcriptional regulator, LysR family -0.71
    14 GFF4906 hypothetical protein -0.70
    15 GFF4862 hypothetical protein -0.69
    16 GFF2741 L-2,4-diaminobutyric acid acetyltransferase (EC 2.3.1.178) -0.68
    17 GFF3085 hypothetical protein -0.68
    18 GFF1691 Two-component transcriptional response regulator, LuxR family -0.68
    19 GFF1410 Alcohol dehydrogenase, zinc-binding domain protein -0.68
    20 GFF2376 Short-chain dehydrogenase -0.68

    Or look for positive cofitness