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  • Negative cofitness for PS417_05005 from Pseudomonas simiae WCS417

    penicillin-binding protein
    SEED: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
    KEGG: D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4)

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_12170 ABC transporter permease -0.20
    2 PS417_17855 major facilitator transporter -0.19
    3 PS417_04270 ribonuclease G -0.18
    4 PS417_26250 peptidase M19 -0.18
    5 PS417_04105 ABC transporter ATP-binding protein -0.18
    6 PS417_23315 transcriptional regulator -0.18
    7 PS417_16005 ATPase -0.17
    8 PS417_25830 serine/threonine protein kinase -0.17
    9 PS417_13610 long-chain fatty acid--CoA ligase -0.17
    10 PS417_16990 acyl-CoA dehydrogenase -0.17
    11 PS417_20130 dehydrogenase -0.17
    12 PS417_04435 uracil phosphoribosyltransferase -0.17
    13 PS417_01710 histidine utilization repressor -0.16
    14 PS417_06530 membrane protein -0.16
    15 PS417_27445 membrane protein -0.16
    16 PS417_24295 carbon starvation protein A -0.16
    17 PS417_17385 aldose epimerase -0.16
    18 PS417_25835 hypothetical protein -0.16
    19 PS417_15030 short-chain dehydrogenase -0.16
    20 PS417_22945 phosphoribosylglycinamide formyltransferase -0.15

    Or look for positive cofitness