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  • Negative cofitness for PS417_04905 from Pseudomonas simiae WCS417

    amino acid ABC transporter permease
    SEED: Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4)
    KEGG: general L-amino acid transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_04675 deoxyribonuclease -0.28
    2 PS417_09220 cupin -0.24
    3 PS417_26875 histidine kinase -0.24
    4 PS417_15710 nitrate reductase -0.23
    5 PS417_28250 cell wall assembly protein -0.22
    6 PS417_19150 ABC transporter ATP-binding protein -0.21
    7 PS417_05830 hypothetical protein -0.21
    8 PS417_25970 diguanylate cyclase -0.21
    9 PS417_20165 hypothetical protein -0.21
    10 PS417_20970 MFS transporter -0.21
    11 PS417_23365 aminotransferase -0.20
    12 PS417_00240 anhydrase -0.20
    13 PS417_27255 glycine cleavage system protein T -0.19
    14 PS417_15720 nitrate reductase -0.19
    15 PS417_10540 NAD-dependent deacetylase -0.19
    16 PS417_05880 ribosomal protein S12 methylthiotransferase -0.19
    17 PS417_17580 citrulline utilization hydrolase (from data) -0.18
    18 PS417_15715 nitrate reductase -0.18
    19 PS417_20965 histidine kinase -0.18
    20 PS417_24680 murein transglycosylase -0.18

    Or look for positive cofitness