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  • Negative cofitness for PS417_04890 from Pseudomonas simiae WCS417

    ATP-dependent RNA helicase RhlB
    SEED: ATP-dependent RNA helicase RhlB
    KEGG: ATP-dependent RNA helicase RhlB

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_20930 50S rRNA methyltransferase -0.28
    2 PS417_24230 ATP-dependent protease -0.25
    3 PS417_08335 hypothetical protein -0.24
    4 PS417_26760 oxidase -0.22
    5 PS417_27485 hypothetical protein -0.22
    6 PS417_08205 acetyltransferase -0.22
    7 PS417_22535 ornithine acetyltransferase -0.22
    8 PS417_08190 membrane protein -0.22
    9 PS417_04060 dipeptide ABC transporter, permease component (from data) -0.22
    10 PS417_02775 heat-shock protein -0.21
    11 PS417_14945 beta-lactamase -0.21
    12 PS417_07620 beta-hexosaminidase -0.21
    13 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) -0.20
    14 PS417_00340 protoheme IX farnesyltransferase -0.20
    15 PS417_26055 cyclic nucleotide-binding protein -0.20
    16 PS417_11825 transcriptional regulator -0.20
    17 PS417_22195 peptidase -0.19
    18 PS417_25120 capsular biosynthesis protein -0.19
    19 PS417_00580 acyl-CoA dehydrogenase -0.19
    20 PS417_17565 branched-chain amino acid aminotransferase -0.19

    Or look for positive cofitness