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  • Negative cofitness for GFF943 from Variovorax sp. SCN45

    Intracellular PHB depolymerase
    SEED: Intracellular PHB depolymerase (EC 3.1.1.-)
    KEGG: poly(3-hydroxybutyrate) depolymerase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) -0.80
    2 GFF1119 Ribonuclease HI (EC 3.1.26.4) -0.72
    3 GFF2835 putative TonB-dependent receptor -0.71
    4 GFF2836 MotA/TolQ/ExbB proton channel family protein -0.70
    5 GFF5429 Iron(III) dicitrate transport protein FecA -0.70
    6 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) -0.68
    7 GFF6392 hypothetical protein -0.68
    8 GFF7342 Oxidoreductase -0.66
    9 GFF3258 hypothetical protein -0.65
    10 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) -0.64
    11 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase -0.63
    12 GFF5035 Opine oxidase subunit A -0.61
    13 GFF4015 KEGG: lactoylglutathione lyase -0.60
    14 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) -0.59
    15 GFF6324 Kup system potassium uptake protein -0.59
    16 GFF5262 Ferric iron ABC transporter, iron-binding protein -0.58
    17 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) -0.58
    18 GFF2922 Oxidoreductase, short-chain dehydrogenase/reductase family -0.57
    19 GFF2505 hypothetical protein -0.57
    20 GFF842 hypothetical protein -0.57

    Or look for positive cofitness