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  • Negative cofitness for PS417_04690 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: DNA-binding heavy metal response regulator
    KEGG: two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_01355 membrane protein -0.55
    2 PS417_23830 hypothetical protein -0.44
    3 PS417_25320 dTDP-4-dehydrorhamnose reductase -0.38
    4 PS417_14480 glycogen synthase -0.37
    5 PS417_22700 RNA polymerase subunit sigma-24 -0.32
    6 PS417_12395 aminopeptidase N -0.31
    7 PS417_05885 potassium transporter Kup -0.29
    8 PS417_20790 adenine phosphoribosyltransferase -0.29
    9 PS417_13195 RND transporter MFP subunit -0.28
    10 PS417_22500 porin -0.28
    11 PS417_00245 oligopeptidase A -0.27
    12 PS417_19535 dihydroneopterin aldolase -0.26
    13 PS417_14835 amidase -0.26
    14 PS417_27130 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) -0.24
    15 PS417_26065 RNA polymerase sigma factor -0.24
    16 PS417_26080 TonB-dependent receptor -0.24
    17 PS417_20155 23S rRNA methyltransferase -0.24
    18 PS417_21680 succinylglutamate desuccinylase -0.24
    19 PS417_00180 tryptophan synthase subunit alpha -0.23
    20 PS417_09560 TonB-dependent receptor -0.23

    Or look for positive cofitness