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  • Negative cofitness for GFF914 from Variovorax sp. SCN45

    ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)
    SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6397 LysR family transcriptional regulator PA2758 -0.58
    2 GFF3937 Transcriptional regulator, AraC family -0.57
    3 GFF3648 putative c'cytochrome -0.55
    4 GFF427 no description -0.55
    5 GFF1497 BUG/TctC family periplasmic protein -0.52
    6 GFF1775 no description -0.51
    7 GFF4272 BUG/TctC family periplasmic protein -0.50
    8 GFF5105 Transcriptional regulator, MerR family -0.49
    9 GFF5293 N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87) -0.49
    10 GFF6287 no description -0.49
    11 GFF6678 Putative inner membrane protein -0.49
    12 GFF6573 Conjugative transfer protein TrbF -0.49
    13 GFF6804 Oxidoreductase, short-chain dehydrogenase/reductase family -0.49
    14 GFF5259 Na+/solute symporter -0.48
    15 GFF1152 Lysine decarboxylase family -0.48
    16 GFF5672 Dna binding response regulator PrrA (RegA) -0.47
    17 GFF1668 BUG/TctC family periplasmic protein -0.47
    18 GFF2316 FIG015547: peptidase, M16 family -0.47
    19 GFF3449 Intradiol ring-cleavage dioxygenase:Catechol dioxygenase, N-terminal -0.46
    20 GFF6575 Conjugative transfer protein TrbJ -0.46

    Or look for positive cofitness