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  • Negative cofitness for GFF913 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
    SEED: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5937 T6SS component TssG (ImpH/VasB) -0.58
    2 GFF6479 hypothetical protein -0.56
    3 GFF5583 Transcriptional regulator PA0181, LysR family -0.54
    4 GFF1275 2-dehydropantoate 2-reductase (EC 1.1.1.169) -0.50
    5 GFF3823 FIG00581576: hypothetical protein -0.49
    6 GFF5169 hypothetical protein -0.48
    7 GFF2959 Uncharacterized protein YfaP -0.48
    8 GFF4549 Cysteine synthase (EC 2.5.1.47) -0.47
    9 GFF4579 putative oxidoreductase, nitronate monooxygenase family -0.46
    10 GFF5397 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.46
    11 GFF5480 no description -0.45
    12 GFF3996 no description -0.45
    13 GFF2003 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) -0.45
    14 GFF3357 hypothetical protein -0.45
    15 GFF3348 Putative lipase -0.45
    16 GFF6308 no description -0.45
    17 GFF64 hypothetical protein -0.45
    18 GFF4705 Monooxygenase, flavin-binding family -0.44
    19 GFF4211 Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18) -0.44
    20 GFF1268 FIG022199: FAD-binding protein -0.43

    Or look for positive cofitness