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  • Negative cofitness for GFF882 from Variovorax sp. SCN45

    Outer membrane porin
    SEED: Outer membrane protein (porin)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6671 Membrane proteins related to metalloendopeptidases -0.56
    2 GFF870 TonB-dependent receptor -0.52
    3 GFF4659 no description -0.49
    4 GFF4060 hypothetical protein -0.49
    5 GFF3100 Aspartyl protease -0.49
    6 GFF3219 hypothetical protein -0.49
    7 GFF4791 RNA polymerase ECF-type sigma factor -0.49
    8 GFF7169 BUG/TctC family periplasmic protein -0.48
    9 GFF5810 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA -0.47
    10 GFF3416 Alkanesulfonates transport system permease protein -0.47
    11 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor -0.47
    12 GFF3395 Benzoate ABC transporter, permease protein 2 -0.46
    13 GFF924 hypothetical protein -0.45
    14 GFF3060 Dihydrodipicolinate synthase family -0.45
    15 GFF189 Negative transcriptional regulator -0.45
    16 GFF4275 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases -0.44
    17 GFF4742 ABC transporter, substrate-binding protein RSc1750 -0.44
    18 GFF1525 RNA polymerase ECF-type sigma factor -0.44
    19 GFF3537 Transcriptional regulator, LysR family -0.44
    20 GFF2608 Transcriptional regulator FrcR for fructose utilization, ROK family -0.43

    Or look for positive cofitness