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  • Negative cofitness for GFF881 from Variovorax sp. SCN45

    Transcriptional regulator ligR, LysR family
    SEED: Transcriptional regulator ligR, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1317 no description -0.61
    2 GFF494 RND efflux system, membrane fusion protein -0.58
    3 GFF282 hypothetical protein -0.57
    4 GFF3217 hypothetical protein -0.56
    5 GFF2770 BUG/TctC family periplasmic protein -0.56
    6 GFF4569 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) -0.54
    7 GFF1499 BUG/TctC family periplasmic protein -0.54
    8 GFF2099 Acyl-CoA dehydrogenase -0.54
    9 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) -0.53
    10 GFF7274 hypothetical protein -0.53
    11 GFF4487 putative secreted protein -0.52
    12 GFF1217 Transcriptional regulator RpiR in protein degradation cluster -0.52
    13 GFF7411 no description -0.51
    14 GFF5273 Various polyols ABC transporter, permease protein 1 -0.51
    15 GFF5930 VgrG protein -0.51
    16 GFF2988 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) -0.51
    17 GFF3361 Hydrolase -0.51
    18 GFF6243 Ku domain protein -0.51
    19 GFF5262 Ferric iron ABC transporter, iron-binding protein -0.50
    20 GFF1863 Uncharacterized MFS-type transporter -0.50

    Or look for positive cofitness