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  • Negative cofitness for GFF878 from Variovorax sp. SCN45

    COGs COG2343
    SEED: Uncharacterized protein conserved in bacteria

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 -0.66
    2 GFF5709 no description -0.64
    3 GFF5902 probable membrane protein STY1534 -0.63
    4 GFF3511 no description -0.63
    5 GFF2958 hypothetical protein -0.62
    6 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.60
    7 GFF6390 GtrA-like protein -0.60
    8 GFF7373 CaiB/BaiF family protein -0.60
    9 GFF5661 hypothetical protein -0.60
    10 GFF3452 hypothetical protein -0.59
    11 GFF4393 Uncharacterized ABC1 family protein XCC_1720 -0.59
    12 GFF2738 hypothetical protein -0.59
    13 GFF803 MutT/Nudix family protein -0.58
    14 GFF2820 ABC-type hemin transport system, ATPase component -0.58
    15 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) -0.58
    16 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) -0.58
    17 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) -0.58
    18 GFF3995 hypothetical protein -0.55
    19 GFF5710 no description -0.55
    20 GFF6856 DipZ protein -0.55

    Or look for positive cofitness