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  • Negative cofitness for PS417_04340 from Pseudomonas simiae WCS417

    ribosome hibernation promoting factor HPF
    SEED: Ribosome hibernation protein YhbH
    KEGG: putative sigma-54 modulation protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06365 RNA polymerase sigma factor -0.49
    2 PS417_20955 secretion protein -0.46
    3 PS417_13425 cupin -0.45
    4 PS417_21050 serine acetyltransferase -0.45
    5 PS417_21040 sulfurylase -0.43
    6 PS417_27605 hypothetical protein -0.42
    7 PS417_21045 cysteine synthase -0.42
    8 PS417_03070 LuxR family transcriptional regulator -0.40
    9 PS417_09900 hypothetical protein -0.39
    10 PS417_21375 ADP-ribosylglycohydrolase -0.37
    11 PS417_00885 integrase -0.36
    12 PS417_12825 MFS transporter -0.35
    13 PS417_00620 GntR family transcriptional regulator -0.35
    14 PS417_12475 hypothetical protein -0.34
    15 PS417_16070 TonB-dependent receptor -0.34
    16 PS417_24605 thiamine-phosphate pyrophosphorylase -0.34
    17 PS417_16160 ABC transporter substrate-binding protein -0.33
    18 PS417_01585 amino acid ABC transporter substrate-binding protein -0.33
    19 PS417_15570 excinuclease ABC subunit A -0.33
    20 PS417_05975 chemotaxis protein CheW -0.32

    Or look for positive cofitness