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  • Negative cofitness for PS417_04305 from Pseudomonas simiae WCS417

    aspartate ammonia-lyase
    SEED: Fumarate hydratase class II (EC 4.2.1.2)
    KEGG: fumarate hydratase, class II

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_02020 LysR family transcriptional regulator -0.24
    2 PS417_27875 histidine kinase -0.23
    3 PS417_07840 hypothetical protein -0.22
    4 PS417_17300 RND transporter -0.22
    5 PS417_00805 hypothetical protein -0.20
    6 PS417_06725 alpha-ketoglutarate permease -0.20
    7 PS417_04865 molybdenum cofactor biosynthesis protein MoaC -0.20
    8 PS417_20525 LysR family transcriptional regulator -0.19
    9 PS417_16515 Clp protease ClpS -0.19
    10 PS417_27885 hypothetical protein -0.19
    11 PS417_21340 short-chain dehydrogenase -0.18
    12 PS417_21395 radical SAM protein -0.18
    13 PS417_13805 4-amino-4-deoxy-L-arabinose transferase -0.18
    14 PS417_13245 saccharopine dehydrogenase -0.18
    15 PS417_27930 type VI secretion protein -0.18
    16 PS417_19585 acyl-CoA dehydrogenase -0.18
    17 PS417_09540 penicillin-binding protein 2 -0.17
    18 PS417_04690 transcriptional regulator -0.17
    19 PS417_01670 Fe-S-oxidoreductase -0.17
    20 PS417_03630 hypothetical protein -0.17

    Or look for positive cofitness