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  • Negative cofitness for GFF808 from Variovorax sp. SCN45

    Polyhydroxyalkanoic acid synthase
    SEED: Polyhydroxyalkanoic acid synthase
    KEGG: polyhydroxyalkanoate synthase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3258 hypothetical protein -0.72
    2 GFF1119 Ribonuclease HI (EC 3.1.26.4) -0.68
    3 GFF4618 Hexuronate utilization operon transcriptional repressor ExuR -0.68
    4 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.66
    5 GFF7342 Oxidoreductase -0.65
    6 GFF2836 MotA/TolQ/ExbB proton channel family protein -0.62
    7 GFF6392 hypothetical protein -0.61
    8 GFF2835 putative TonB-dependent receptor -0.61
    9 GFF2922 Oxidoreductase, short-chain dehydrogenase/reductase family -0.61
    10 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) -0.61
    11 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) -0.60
    12 GFF3650 FIG00932140: hypothetical protein -0.60
    13 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) -0.60
    14 GFF5326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) -0.58
    15 GFF5429 Iron(III) dicitrate transport protein FecA -0.58
    16 GFF2505 hypothetical protein -0.58
    17 GFF6686 Peroxide stress regulator; Ferric uptake regulation protein; Fe2+/Zn2+ uptake regulation proteins -0.58
    18 GFF6637 Putative amidase amiC (EC 3.5.1.4) -0.57
    19 GFF6082 MoxR-like ATPase in aerotolerance operon -0.57
    20 GFF5781 Transcriptional regulator, LysR family -0.57

    Or look for positive cofitness