• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_04060 from Pseudomonas simiae WCS417

    dipeptide ABC transporter, permease component (from data)
    Original annotation: peptide ABC transporter permease
    SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
    KEGG: dipeptide transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_24680 murein transglycosylase -0.43
    2 PS417_19545 peptide synthase -0.41
    3 PS417_11690 peptide synthase -0.39
    4 PS417_21275 GntR family transcriptional regulator -0.38
    5 PS417_11695 peptide synthase -0.36
    6 PS417_17625 ornithine monooxygenase -0.32
    7 PS417_28250 cell wall assembly protein -0.31
    8 PS417_17000 MerR family transcriptional regulator -0.30
    9 PS417_04005 ornithine decarboxylase -0.29
    10 PS417_14390 acyl-homoserine lactone acylase subunit beta -0.28
    11 PS417_24265 ABC transporter ATP-binding protein -0.27
    12 PS417_08865 large component of pyruvate transporter (actP-like) (from data) -0.26
    13 PS417_21700 arginine N-succinyltransferase -0.26
    14 PS417_26895 phosphorylcholine phosphatase -0.25
    15 PS417_24220 hypothetical protein -0.25
    16 PS417_19140 TenA family transcriptional regulator -0.24
    17 PS417_03050 hypothetical protein -0.24
    18 PS417_18355 DNA-binding protein -0.24
    19 PS417_22710 TonB-dependent receptor -0.24
    20 PS417_15565 transketolase -0.24

    Or look for positive cofitness