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  • Negative cofitness for PS417_04050 from Pseudomonas simiae WCS417

    peptide ABC transporter ATP-binding protein
    SEED: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
    KEGG: dipeptide transport system ATP-binding protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_24680 murein transglycosylase -0.38
    2 PS417_03075 hypothetical protein -0.29
    3 PS417_28250 cell wall assembly protein -0.26
    4 PS417_21275 GntR family transcriptional regulator -0.25
    5 PS417_24220 hypothetical protein -0.24
    6 PS417_22200 hypothetical protein -0.24
    7 PS417_20165 hypothetical protein -0.23
    8 PS417_19180 sugar-binding protein -0.23
    9 PS417_25635 biotin--protein ligase -0.23
    10 PS417_03055 histidine kinase -0.23
    11 PS417_03905 fimbrial protein -0.22
    12 PS417_09635 mannose-1-phosphate guanylyltransferase -0.22
    13 PS417_05355 exotoxin -0.22
    14 PS417_22325 amino acid APC transporter -0.22
    15 PS417_03085 type II secretion system protein F -0.22
    16 PS417_26410 alginate lyase -0.22
    17 PS417_13425 cupin -0.22
    18 PS417_12825 MFS transporter -0.21
    19 PS417_15565 transketolase -0.21
    20 PS417_16070 TonB-dependent receptor -0.21

    Or look for positive cofitness