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  • Negative cofitness for PS417_04025 from Pseudomonas simiae WCS417

    glycine/betaine ABC transporter permease
    SEED: L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)
    KEGG: osmoprotectant transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_23155 pilus assembly protein PilW -0.26
    2 PS417_27810 ribonuclease PH -0.26
    3 PS417_26310 serine dehydratase -0.23
    4 PS417_07855 hypothetical protein -0.22
    5 PS417_09325 peptidase S41 -0.21
    6 PS417_23080 sugar ABC transporter ATPase -0.20
    7 PS417_24320 large-conductance mechanosensitive channel -0.20
    8 PS417_15090 hypothetical protein -0.19
    9 PS417_14950 structural protein MipA -0.19
    10 PS417_01305 Fis family transcriptional regulator -0.19
    11 PS417_27610 hypothetical protein -0.19
    12 PS417_01855 phosphoribosyl-AMP cyclohydrolase -0.19
    13 PS417_22190 diguanylate cyclase -0.19
    14 PS417_21425 4-amino-4-deoxychorismate lyase -0.19
    15 PS417_04365 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase -0.18
    16 PS417_08990 ABC transporter substrate-binding protein -0.18
    17 PS417_08160 hypothetical protein -0.18
    18 PS417_25010 fimbrial assembly protein -0.18
    19 PS417_20675 hydroxyacylglutathione hydrolase -0.18
    20 PS417_06625 hypothetical protein -0.18

    Or look for positive cofitness