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  • Negative cofitness for PS417_04020 from Pseudomonas simiae WCS417

    glycine/betaine ABC transporter substrate-binding protein
    SEED: L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation
    KEGG: osmoprotectant transport system substrate-binding protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_27810 ribonuclease PH -0.29
    2 PS417_19555 RNA polymerase sigma70 -0.25
    3 PS417_22400 7-cyano-7-deazaguanine synthase -0.22
    4 PS417_17385 aldose epimerase -0.22
    5 PS417_02495 GTPase HflX -0.22
    6 PS417_10770 transglycosylase -0.22
    7 PS417_13370 short-chain dehydrogenase -0.21
    8 PS417_09325 peptidase S41 -0.21
    9 PS417_08990 ABC transporter substrate-binding protein -0.20
    10 PS417_22620 pyruvate kinase -0.20
    11 PS417_06645 RNA polymerase-associated protein RapA -0.20
    12 PS417_02270 carbamoyltransferase -0.20
    13 PS417_23155 pilus assembly protein PilW -0.20
    14 PS417_15200 protein activator of alkane oxidation PraB -0.20
    15 PS417_23900 poly(A) polymerase -0.20
    16 PS417_27520 uroporphyrin-III methyltransferase -0.20
    17 PS417_10745 hypothetical protein -0.19
    18 PS417_17610 AsnC family transcriptional regulator -0.19
    19 PS417_06915 hypothetical protein -0.19
    20 PS417_23595 D-aminoacylase -0.19

    Or look for positive cofitness