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  • Negative cofitness for PS417_04015 from Pseudomonas simiae WCS417

    choline ABC transporter permease
    SEED: L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)
    KEGG: osmoprotectant transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_16560 GNAT family acetyltransferase -0.22
    2 PS417_27810 ribonuclease PH -0.21
    3 PS417_18445 glycerol-3-phosphatase -0.20
    4 PS417_26660 protein PilI -0.20
    5 PS417_06915 hypothetical protein -0.20
    6 PS417_03535 type III secretion protein -0.20
    7 PS417_02985 diguanylate cyclase -0.20
    8 PS417_22530 hypothetical protein -0.19
    9 PS417_18355 DNA-binding protein -0.19
    10 PS417_15255 serine/threonine protein kinase -0.19
    11 PS417_18370 hypothetical protein -0.19
    12 PS417_23760 DeoR faimly transcriptional regulator -0.19
    13 PS417_24750 3-methyladenine DNA glycosylase -0.19
    14 PS417_13370 short-chain dehydrogenase -0.18
    15 PS417_25070 hypothetical protein -0.18
    16 PS417_11900 conjugal transfer protein TraR -0.18
    17 PS417_26645 chemotaxis protein -0.18
    18 PS417_27610 hypothetical protein -0.18
    19 PS417_22390 lactate dehydrogenase -0.18
    20 PS417_08105 N-ethylammeline chlorohydrolase -0.17

    Or look for positive cofitness