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  • Negative cofitness for PS417_03955 from Pseudomonas simiae WCS417

    hydrolase TatD
    SEED: Putative deoxyribonuclease YjjV
    KEGG: TatD DNase family protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_07035 uracil-DNA glycosylase -0.21
    2 PS417_09220 cupin -0.19
    3 PS417_23730 LysR family transcriptional regulator -0.18
    4 PS417_24265 ABC transporter ATP-binding protein -0.18
    5 PS417_07330 4-hydroxybenzoate 3-monooxygenase -0.18
    6 PS417_25970 diguanylate cyclase -0.17
    7 PS417_16495 leucyl/phenylalanyl-tRNA--protein transferase -0.17
    8 PS417_15695 molybdenum cofactor biosynthesis protein A -0.17
    9 PS417_16065 3-phytase -0.17
    10 PS417_19010 LysR family transcriptional regulator -0.17
    11 PS417_02985 diguanylate cyclase -0.17
    12 PS417_17630 RNA polymerase sigma factor -0.16
    13 PS417_28250 cell wall assembly protein -0.16
    14 PS417_10675 TetR family transcriptional regulator -0.16
    15 PS417_00345 copper-binding protein -0.16
    16 PS417_13915 cell envelope protein -0.16
    17 PS417_25755 spermidine/putrescine ABC transporter substrate-binding protein -0.15
    18 PS417_16560 GNAT family acetyltransferase -0.15
    19 PS417_11875 Inositol 2-dehydrogenase (EC 1.1.1.18) (from data) -0.15
    20 PS417_12705 ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) -0.15

    Or look for positive cofitness