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  • Negative cofitness for PS417_03935 from Pseudomonas simiae WCS417

    N-acetyl-anhydromuranmyl-L-alanine amidase
    SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD
    KEGG: AmpD protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_13425 cupin -0.36
    2 PS417_00620 GntR family transcriptional regulator -0.33
    3 PS417_27475 membrane protein -0.31
    4 PS417_21045 cysteine synthase -0.30
    5 PS417_04995 glutathione S-transferase -0.29
    6 PS417_22230 class I peptide chain release factor -0.29
    7 PS417_21040 sulfurylase -0.29
    8 PS417_20955 secretion protein -0.29
    9 PS417_16825 membrane protein -0.28
    10 PS417_21050 serine acetyltransferase -0.28
    11 PS417_06365 RNA polymerase sigma factor -0.28
    12 PS417_24605 thiamine-phosphate pyrophosphorylase -0.28
    13 PS417_28535 TonB-dependent receptor -0.27
    14 PS417_12610 RNA polymerase sigma factor -0.27
    15 PS417_22000 glutathione S-transferase -0.26
    16 PS417_23950 polynucleotide phosphorylase/polyadenylase -0.26
    17 PS417_23635 membrane protein -0.25
    18 PS417_16070 TonB-dependent receptor -0.25
    19 PS417_05975 chemotaxis protein CheW -0.25
    20 PS417_19145 membrane protein -0.25

    Or look for positive cofitness