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  • Negative cofitness for PS417_03900 from Pseudomonas simiae WCS417

    type II secretion system protein F
    SEED: Type IV fimbrial assembly protein PilC
    KEGG: type IV pilus assembly protein PilC

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_15330 type VI secretion protein ImpA -0.27
    2 PS417_07035 uracil-DNA glycosylase -0.27
    3 PS417_22640 cytochrome C biogenesis protein CcmE -0.22
    4 PS417_00930 ABC transporter permease -0.22
    5 PS417_10165 hydrolase Nlp/P60 -0.22
    6 PS417_05785 tail protein -0.21
    7 PS417_25120 capsular biosynthesis protein -0.21
    8 PS417_00535 Holliday junction resolvase -0.21
    9 PS417_08740 ribose-phosphate pyrophosphokinase -0.21
    10 PS417_04980 response regulator receiver protein -0.21
    11 PS417_04075 peptide ABC transporter substrate-binding protein -0.21
    12 PS417_19195 hypothetical protein -0.20
    13 PS417_18855 peptidase -0.20
    14 PS417_14800 diguanylate cyclase -0.20
    15 PS417_23205 transcriptional regulator -0.20
    16 PS417_18625 hypothetical protein -0.20
    17 PS417_05790 hypothetical protein -0.20
    18 PS417_09890 hypothetical protein -0.20
    19 PS417_10045 hypothetical protein -0.19
    20 PS417_07980 twitching motility protein PilT -0.19

    Or look for positive cofitness