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  • Negative cofitness for PS417_03815 from Pseudomonas simiae WCS417

    DNA transporter
    SEED: Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB)
    KEGG: putative lipoprotein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_22215 membrane protein -0.31
    2 PS417_00840 hypothetical protein -0.29
    3 PS417_04770 LysR family transcriptional regulator -0.27
    4 PS417_08085 diguanylate cyclase -0.26
    5 PS417_15640 DNA methylase -0.25
    6 PS417_24860 hypothetical protein -0.23
    7 PS417_20420 reverse transcriptase -0.23
    8 PS417_10170 hypothetical protein -0.23
    9 PS417_02080 histidine ammonia-lyase -0.21
    10 PS417_28370 cadmium ABC transporter ATPase -0.21
    11 PS417_04940 outer membrane usher protein -0.21
    12 PS417_14390 acyl-homoserine lactone acylase subunit beta -0.21
    13 PS417_20585 chemotaxis protein -0.20
    14 PS417_19620 hypothetical protein -0.20
    15 PS417_15440 iron ABC transporter substrate-binding protein -0.20
    16 PS417_23065 hypothetical protein -0.20
    17 PS417_09715 hypothetical protein -0.20
    18 PS417_01185 ribosomal protein S6 modification protein -0.20
    19 PS417_25975 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) -0.20
    20 PS417_05710 hypothetical protein -0.20

    Or look for positive cofitness