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  • Negative cofitness for PS417_03780 from Pseudomonas simiae WCS417

    general secretion pathway protein GspH
    SEED: Type IV fimbrial biogenesis protein FimT
    KEGG: type IV fimbrial biogenesis protein FimT

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_23725 methylmalonate-semialdehyde dehydrogenase -0.20
    2 PS417_24155 ATP-binding protein -0.20
    3 PS417_10540 NAD-dependent deacetylase -0.20
    4 PS417_03490 type III secretion system protein SsaR -0.19
    5 PS417_19965 histidine kinase -0.19
    6 PS417_04410 hypothetical protein -0.19
    7 PS417_20860 DNA polymerase III subunit gamma/tau -0.18
    8 PS417_26915 GTPase SAR1 -0.18
    9 PS417_20125 phosphoribosylglycinamide formyltransferase -0.18
    10 PS417_16465 sirohydrochlorin ferrochelatase -0.18
    11 PS417_10210 hypothetical protein -0.17
    12 PS417_09790 hypothetical protein -0.17
    13 PS417_12290 sulfite reductase -0.17
    14 PS417_20310 hypothetical protein -0.17
    15 PS417_05290 hypothetical protein -0.17
    16 PS417_01850 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) -0.17
    17 PS417_20550 hypothetical protein -0.17
    18 PS417_14925 2-methylcitrate dehydratase -0.17
    19 PS417_23800 ketol-acid reductoisomerase -0.17
    20 PS417_17990 hypothetical protein -0.17

    Or look for positive cofitness