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  • Negative cofitness for GFF74 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2255 Ribonuclease Z (EC 3.1.26.11) -0.57
    2 GFF1063 dioxygenase, TauD/TfdA family -0.55
    3 GFF4221 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) -0.53
    4 GFF3081 no description -0.53
    5 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.53
    6 GFF7289 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) -0.52
    7 GFF1230 Malic enzyme -0.51
    8 GFF6833 FIG00432169: hypothetical protein -0.48
    9 GFF5086 Glycine betaine transporter OpuD -0.48
    10 GFF7321 Sensor histidine kinase GlrK -0.47
    11 GFF923 Chromosome partition protein smc -0.47
    12 GFF564 hypothetical protein -0.47
    13 GFF2144 tRNA-dihydrouridine synthase DusB -0.47
    14 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component -0.47
    15 GFF7042 Acetyltransferase, GNAT family -0.46
    16 GFF3496 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.46
    17 GFF5334 Phospholipid ABC transporter ATP-binding protein MlaF -0.46
    18 GFF4382 FIG00957806: hypothetical protein -0.46
    19 GFF5825 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) -0.45
    20 GFF2023 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) -0.45

    Or look for positive cofitness