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  • Negative cofitness for GFF7358 from Variovorax sp. SCN45

    Phenylacetate ABC transporter, permease protein 2
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF110 pyridoxal-phosphate dependent enzyme family protein -0.61
    2 GFF6579 Conjugative transfer protein TrbB -0.61
    3 GFF5272 Various polyols ABC transporter, substrate-binding protein -0.61
    4 GFF4304 Cyclohexanecarboxylate--CoA ligase -0.61
    5 GFF1745 Acyl-CoA dehydrogenase -0.60
    6 GFF3869 Putative transmembrane protein -0.59
    7 GFF2212 KEGG: prepilin peptidase CpaA -0.59
    8 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) -0.58
    9 GFF3481 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.57
    10 GFF3127 no description -0.57
    11 GFF6928 Putative transmembrane protein -0.56
    12 GFF3381 Broad-specificity amino acid ABC transporter, substrate-binding protein -0.56
    13 GFF7046 FIG00854755: hypothetical protein -0.56
    14 GFF203 hypothetical protein -0.55
    15 GFF2236 hypothetical protein -0.55
    16 GFF6861 no description -0.55
    17 GFF1948 Phage integrase -0.54
    18 GFF862 hypothetical protein -0.54
    19 GFF1185 Transcriptional regulator, AraC family -0.53
    20 GFF2602 no description -0.53

    Or look for positive cofitness