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  • Negative cofitness for GFF7344 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3026 KEGG: type VI secretion system protein -0.66
    2 GFF2728 hypothetical protein -0.58
    3 GFF5259 Na+/solute symporter -0.56
    4 GFF156 Glycosyl transferase, group 2 family -0.55
    5 GFF640 no description -0.51
    6 GFF5610 hypothetical protein -0.50
    7 GFF5432 Glutathione S-transferase family protein -0.50
    8 GFF142 Oxidoreductase -0.49
    9 GFF5618 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.49
    10 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) -0.48
    11 GFF212 Ribosome association toxin RatA -0.48
    12 GFF4580 hypothetical protein -0.48
    13 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) -0.48
    14 GFF6175 hypothetical protein -0.47
    15 GFF3597 TRAP-type C4-dicarboxylate transport system, small permease component -0.47
    16 GFF6784 D-amino acid dehydrogenase (EC 1.4.99.6) -0.47
    17 GFF4129 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.47
    18 GFF5263 Ferric iron ABC transporter, permease protein -0.47
    19 GFF637 Two-component system sensor histidine kinase/response regulator hybrid -0.47
    20 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) -0.47

    Or look for positive cofitness