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  • Negative cofitness for GFF7286 from Variovorax sp. SCN45

    Dipeptide ABC transporter, ATP-binding protein DppD (TC 3.A.1.5.2)
    SEED: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
    KEGG: dipeptide transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4494 hypothetical protein -0.55
    2 GFF4649 Iron-chelator utilization protein -0.53
    3 GFF5612 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) -0.49
    4 GFF142 Oxidoreductase -0.48
    5 GFF5300 ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.48
    6 GFF1402 3-demethylubiquinone-9 3-methyltransferase -0.47
    7 GFF7273 UDP-glucose 4-epimerase (EC 5.1.3.2) -0.47
    8 GFF3827 UPF0118 membrane protein SMc00793 -0.47
    9 GFF6237 hypothetical protein -0.46
    10 GFF7358 Phenylacetate ABC transporter, permease protein 2 -0.45
    11 GFF598 no description -0.45
    12 GFF3169 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.44
    13 GFF1903 Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching -0.44
    14 GFF3955 Histidinol-phosphate aminotransferase (EC 2.6.1.9) -0.44
    15 GFF1422 L-lactate dehydrogenase -0.44
    16 GFF6936 ABC transporter, ATP-binding protein -0.44
    17 GFF3224 no description -0.43
    18 GFF2924 BUG/TctC family periplasmic protein -0.43
    19 GFF6391 RfbJ protein -0.42
    20 GFF59 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) -0.42

    Or look for positive cofitness