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  • Negative cofitness for GFF725 from Variovorax sp. SCN45

    TonB-dependent siderophore receptor
    SEED: TonB-dependent siderophore receptor
    KEGG: iron complex outermembrane recepter protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3906 Acyl-CoA dehydrogenase -0.58
    2 GFF5291 Ferrichrome-iron receptor -0.57
    3 GFF971 NLP/P60 protein -0.56
    4 GFF4417 Conjugative transfer protein TrbE -0.54
    5 GFF2830 Uncharacterized protein CC_3061 -0.54
    6 GFF6659 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) -0.53
    7 GFF2817 Probable proline-rich protein -0.53
    8 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake -0.53
    9 GFF6172 Na(+) H(+) antiporter subunit C -0.52
    10 GFF5455 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) -0.51
    11 GFF5298 FIG01204242: hypothetical protein -0.51
    12 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.51
    13 GFF375 hypothetical protein -0.51
    14 GFF3910 MORN repeat family protein -0.50
    15 GFF245 Aspartate aminotransferase (EC 2.6.1.1) -0.50
    16 GFF250 Homoserine/homoserine lactone efflux protein -0.49
    17 GFF2738 hypothetical protein -0.49
    18 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) -0.49
    19 GFF248 Cell division protein FtsH (EC 3.4.24.-) -0.49
    20 GFF4425 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8) -0.49

    Or look for positive cofitness