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  • Negative cofitness for GFF7195 from Variovorax sp. SCN45

    Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6645 no description -0.57
    2 GFF1330 UPF0061 protein YdiU -0.51
    3 GFF583 Tripartite tricarboxylate transporter TctB family -0.48
    4 GFF5025 Aspartate aminotransferase (EC 2.6.1.1) -0.48
    5 GFF7194 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.46
    6 GFF5670 Protein SlyX -0.46
    7 GFF6503 no description -0.46
    8 GFF4594 Aspartate ammonia-lyase (EC 4.3.1.1) -0.45
    9 GFF5501 Glyoxalase family protein -0.45
    10 GFF7116 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39) -0.45
    11 GFF6284 Cytochrome b561 -0.45
    12 GFF7354 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) -0.43
    13 GFF1512 no description -0.42
    14 GFF334 Transcriptional regulator, AraC family -0.42
    15 GFF5303 Tricarboxylate transport transcriptional regulator TctD -0.42
    16 GFF2031 ABC-type branched-chain amino acid transport systems, periplasmic component -0.42
    17 GFF4846 Conjugative transfer protein TrbE -0.42
    18 GFF958 ElaB protein -0.41
    19 GFF5814 Rhodanese-related sulfurtransferase -0.41
    20 GFF1044 hypothetical protein -0.41

    Or look for positive cofitness