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  • Negative cofitness for GFF7142 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4185 RNA polymerase ECF-type sigma factor -0.48
    2 GFF6612 y4eB gene in pNGR234a homolog -0.46
    3 GFF2672 ABC transporter, ATP-binding protein -0.46
    4 GFF1074 no description -0.44
    5 GFF4726 hypothetical protein -0.44
    6 GFF7083 Mobile element protein -0.44
    7 GFF6932 no description -0.43
    8 GFF1355 Transcriptional regulator, LysR family -0.43
    9 GFF7287 Dipeptide ABC transporter, ATP-binding protein DppF (TC 3.A.1.5.2) -0.43
    10 GFF567 KEGG: type IV fimbrial biogenesis protein FimT -0.42
    11 GFF821 Acetoacetyl-CoA reductase (EC 1.1.1.36) -0.42
    12 GFF1242 hypothetical protein -0.42
    13 GFF785 Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system -0.42
    14 GFF7003 Flagellar basal-body rod protein FlgF -0.42
    15 GFF589 Pirin -0.41
    16 GFF512 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.41
    17 GFF5901 no description -0.41
    18 GFF3209 no description -0.41
    19 GFF584 Tripartite tricarboxylate transporter TctA family -0.41
    20 GFF6502 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) -0.41

    Or look for positive cofitness