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  • Negative cofitness for GFF7116 from Variovorax sp. SCN45

    2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39)
    SEED: 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39)
    KEGG: 2,3-dihydroxyethylbenzene 1,2-dioxygenase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.61
    2 GFF5769 Chemotaxis response - phosphatase CheZ -0.60
    3 GFF7203 Two-component transcriptional response regulator, LuxR family -0.57
    4 GFF6383 FIG00440100: hypothetical protein -0.57
    5 GFF412 Transcription-repair coupling factor -0.56
    6 GFF3204 no description -0.56
    7 GFF6101 Ser/Thr protein phosphatase family protein -0.55
    8 GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) -0.55
    9 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) -0.54
    10 GFF808 Polyhydroxyalkanoic acid synthase -0.54
    11 GFF5003 FIG00348156: hypothetical protein -0.53
    12 GFF3477 Phosphoprotein phosphatase -0.53
    13 GFF3017 T6SS AAA+ chaperone ClpV (TssH) -0.52
    14 GFF4694 no description -0.52
    15 GFF1865 Transcriptional regulator, AraC family -0.52
    16 GFF5742 Flagellar motor switch protein FliN -0.52
    17 GFF6870 FIG00904791: hypothetical protein -0.52
    18 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) -0.52
    19 GFF6349 no description -0.51
    20 GFF4576 BUG/TctC family periplasmic protein -0.51

    Or look for positive cofitness