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  • Negative cofitness for GFF708 from Variovorax sp. SCN45

    Oxidoreductase, GMC family
    SEED: Choline dehydrogenase (EC 1.1.99.1)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6659 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) -0.55
    2 GFF5860 no description -0.54
    3 GFF6359 FIG01219766: hypothetical protein -0.54
    4 GFF5855 T1SS secreted agglutinin RTX -0.54
    5 GFF1130 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) -0.51
    6 GFF534 Two-component system sensor histidine kinase -0.50
    7 GFF5947 Large extracellular alpha-helical protein -0.50
    8 GFF4230 Transcriptional regulator of pyridoxine metabolism / Pyridoxamine phosphate aminotransferase (EC 2.6.1.54) -0.49
    9 GFF4426 Homolog of eukaryotic DNA ligase III -0.49
    10 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.49
    11 GFF7251 Mobile element protein -0.49
    12 GFF6719 hypothetical protein -0.48
    13 GFF5936 T6SS AAA+ chaperone ClpV (TssH) -0.48
    14 GFF5643 no description -0.48
    15 GFF2505 hypothetical protein -0.48
    16 GFF1847 Nucleoside ABC transporter, substrate-binding protein -0.46
    17 GFF2802 DUF1176 domain-containing protein -0.46
    18 GFF1027 Ribonuclease BN -0.46
    19 GFF5000 PUTATIVE ZINC PROTEASE PROTEIN -0.46
    20 GFF4237 no description -0.45

    Or look for positive cofitness