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  • Negative cofitness for GFF7036 from Variovorax sp. SCN45

    LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28)
    SEED: Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase A

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7046 FIG00854755: hypothetical protein -0.61
    2 GFF184 Adenylate cyclase (EC 4.6.1.1) -0.52
    3 GFF6579 Conjugative transfer protein TrbB -0.51
    4 GFF6861 no description -0.50
    5 GFF6 hypothetical protein -0.50
    6 GFF2389 hypothetical protein -0.49
    7 GFF5272 Various polyols ABC transporter, substrate-binding protein -0.49
    8 GFF6434 Inner membrane protein YqiK -0.49
    9 GFF2188 Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-) -0.48
    10 GFF6037 Transcriptional regulator, Crp/Fnr family -0.48
    11 GFF4164 Thymidine phosphorylase (EC 2.4.2.4) -0.48
    12 GFF5266 Transaldolase (EC 2.2.1.2) -0.47
    13 GFF2602 no description -0.47
    14 GFF2643 Oxidoreductase, short-chain dehydrogenase/reductase family -0.46
    15 GFF4703 Xylitol dehydrogenase (EC 1.1.1.9) -0.46
    16 GFF7344 Transcriptional regulator, LysR family -0.46
    17 GFF3128 T6SS PAAR-repeat protein / RhaS protein -0.45
    18 GFF5281 Xylulose kinase (EC 2.7.1.17) -0.45
    19 GFF498 Squalene/phytoene desaturase HopC -0.45
    20 GFF1864 Transcriptional regulator, LysR family -0.45

    Or look for positive cofitness