• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF7017 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF338 Chloramphenicol acetyltransferase (EC 2.3.1.28) -0.52
    2 GFF3322 hypothetical protein -0.52
    3 GFF6918 Transcriptional regulator, AraC family -0.49
    4 GFF1185 Transcriptional regulator, AraC family -0.48
    5 GFF6479 hypothetical protein -0.48
    6 GFF6950 Acetoacetyl-CoA reductase (EC 1.1.1.36) -0.48
    7 GFF5196 L-arabinose ABC transporter, permease protein AraH -0.47
    8 GFF4418 Conjugative transfer protein TrbJ -0.47
    9 GFF6491 SAM-dependent methyltransferase -0.46
    10 GFF5087 DNA repair protein RadA -0.45
    11 GFF6422 Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17) -0.45
    12 GFF146 hypothetical protein -0.45
    13 GFF5409 FIG00576366: hypothetical protein -0.45
    14 GFF6438 hypothetical protein -0.45
    15 GFF4252 hypothetical protein -0.45
    16 GFF4810 Ferrichrome-iron receptor -0.45
    17 GFF2614 no description -0.44
    18 GFF5920 no description -0.44
    19 GFF6635 FIG00441227: hypothetical protein -0.44
    20 GFF6604 FIG00457034: hypothetical protein -0.44

    Or look for positive cofitness