• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_03545 from Pseudomonas simiae WCS417

    type III secretion protein
    SEED: Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)
    KEGG: type III secretion protein SctJ

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_18100 iron ABC transporter -0.30
    2 PS417_22315 DNA-3-methyladenine glycosylase -0.27
    3 PS417_00330 hypothetical protein -0.26
    4 PS417_23435 serine/threonine protein kinase -0.24
    5 PS417_20930 50S rRNA methyltransferase -0.23
    6 PS417_10380 catalase -0.23
    7 PS417_06020 membrane protein -0.22
    8 PS417_04275 hypothetical protein -0.22
    9 PS417_24130 integrase -0.22
    10 PS417_03140 3-ketoacyl-ACP reductase -0.22
    11 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase -0.22
    12 PS417_05300 glucose dehydrogenase -0.21
    13 PS417_21895 nuclease PIN -0.21
    14 PS417_14040 alkyl hydroperoxide reductase -0.21
    15 PS417_24470 hypothetical protein -0.21
    16 PS417_02060 FAD-dependent oxidoreductase -0.21
    17 PS417_01480 SAM-dependent methyltransferase -0.21
    18 PS417_17215 peptidylprolyl isomerase -0.21
    19 PS417_01215 membrane protein -0.20
    20 PS417_03215 8-oxoguanine deaminase -0.20

    Or look for positive cofitness