• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF6963 from Variovorax sp. SCN45

    Cytochrome c oxidase (cbb3-type) subunit CcoO (EC 1.9.3.1)
    SEED: Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)
    KEGG: cb-type cytochrome c oxidase subunit II

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5807 hypothetical protein -0.57
    2 GFF4007 Glutamate carboxypeptidase (EC 3.4.17.11) -0.56
    3 GFF2368 ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) -0.55
    4 GFF1523 KEGG: transmembrane sensor -0.54
    5 GFF5481 hypothetical protein -0.53
    6 GFF3056 Nitrogen assimilation regulatory protein Nac -0.52
    7 GFF4034 Cobalt/zinc/cadmium resistance protein CzcD -0.52
    8 GFF7099 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) -0.51
    9 GFF1430 hypothetical protein -0.51
    10 GFF2903 no description -0.51
    11 GFF6588 Glyoxylate carboligase (EC 4.1.1.47) -0.49
    12 GFF779 hypothetical protein -0.49
    13 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) -0.48
    14 GFF2207 Flp pilus assembly protein TadB -0.47
    15 GFF3171 Uncharacterized protein conserved in bacteria -0.47
    16 GFF3655 no description -0.47
    17 GFF4812 no description -0.46
    18 GFF1989 MBL-fold metallo-hydrolase superfamily -0.45
    19 GFF4247 no description -0.45
    20 GFF5456 L-threonate/D-erythronate transcriptional regulator, GntR family -0.45

    Or look for positive cofitness