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  • Negative cofitness for GFF6947 from Variovorax sp. SCN45

    transcriptional regulator, Crp/Fnr family
    SEED: transcriptional regulator, Crp/Fnr family
    KEGG: CRP/FNR family transcriptional regulator, anaerobic regulatory protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4511 Transcriptional regulator, LysR family -0.57
    2 GFF5209 DUF1854 domain-containing protein -0.55
    3 GFF4563 Ferredoxin, 2Fe-2S -0.53
    4 GFF6966 Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) -0.52
    5 GFF5377 Transcriptional regulator, AcrR family -0.50
    6 GFF3821 RND efflux system, inner membrane transporter -0.50
    7 GFF5832 MoaF protein precursor -0.48
    8 GFF3777 Prolyl endopeptidase (EC 3.4.21.26) -0.48
    9 GFF6396 hypothetical protein -0.48
    10 GFF140 Putative transport protein -0.48
    11 GFF5517 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) -0.47
    12 GFF307 FIG143263: Glycosyl transferase -0.47
    13 GFF5542 no description -0.47
    14 GFF2380 Protein phosphatase 2C-like -0.46
    15 GFF7184 hypothetical protein -0.46
    16 GFF5476 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.46
    17 GFF5583 Transcriptional regulator PA0181, LysR family -0.45
    18 GFF5433 Oxidoreductase, short-chain dehydrogenase/reductase family -0.45
    19 GFF4962 Multidrug resistance transporter, Bcr/CflA family -0.45
    20 GFF1853 no description -0.45

    Or look for positive cofitness