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  • Negative cofitness for GFF6906 from Variovorax sp. SCN45

    Transcriptional regulator, MarR family
    SEED: Transcriptional regulator, MarR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3238 no description -0.61
    2 GFF115 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.52
    3 GFF6350 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA -0.52
    4 GFF899 Dienelactone hydrolase family protein -0.51
    5 GFF646 no description -0.49
    6 GFF4237 no description -0.49
    7 GFF7355 1,2-phenylacetyl-CoA epoxidase, subunit A (EC 1.14.13.149) -0.48
    8 GFF3338 Threonine efflux protein -0.47
    9 GFF3410 Transcriptional regulator, AraC family -0.47
    10 GFF2372 Similar to citrate lyase beta chain, 3 -0.46
    11 GFF3366 Septum site-determining protein MinD -0.45
    12 GFF6788 Multicopper oxidase -0.45
    13 GFF4245 Cytochrome c peroxidase (EC 1.11.1.5) -0.45
    14 GFF6884 FIG00932717: hypothetical protein -0.44
    15 GFF3647 Cytochrome b -0.44
    16 GFF5275 Various polyols ABC transporter, ATP-binding protein -0.44
    17 GFF5245 FIG00771430: hypothetical protein -0.43
    18 GFF611 hypothetical protein -0.43
    19 GFF6752 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 1.2.1.91) / 2-oxepin-2(3H)-ylideneacetyl-CoA hydrolase (EC 3.3.2.12) -0.43
    20 GFF4368 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) -0.42

    Or look for positive cofitness