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  • Negative cofitness for GFF6903 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3696 mRNA 3-end processing factor -0.59
    2 GFF4716 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.58
    3 GFF3516 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) -0.55
    4 GFF3204 no description -0.52
    5 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) -0.50
    6 GFF633 Urea ABC transporter, ATPase protein UrtD -0.49
    7 GFF3226 no description -0.48
    8 GFF7031 hypothetical protein -0.47
    9 GFF6937 Membrane protein -0.47
    10 GFF6902 Oxidoreductase, short-chain dehydrogenase/reductase family -0.47
    11 GFF1455 DNA polymerase II (EC 2.7.7.7) -0.47
    12 GFF477 Transcriptional regulator, LysR family -0.46
    13 GFF7264 Gluconolactonase (EC 3.1.1.17) -0.46
    14 GFF5996 BUG/TctC family periplasmic protein -0.45
    15 GFF4058 Copper/silver efflux RND transporter, outer membrane protein CusC -0.45
    16 GFF3768 no description -0.45
    17 GFF7107 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases -0.44
    18 GFF5857 Fe2+-dicitrate sensor, membrane component -0.44
    19 GFF3039 Two-component transcriptional response regulator, LuxR family -0.44
    20 GFF7321 Sensor histidine kinase GlrK -0.44

    Or look for positive cofitness