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  • Negative cofitness for PS417_03500 from Pseudomonas simiae WCS417

    type III secretion system protein
    SEED: Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components)
    KEGG: type III secretion protein SctT

    Computing cofitness values with 554 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_23580 peptidylprolyl isomerase -0.21
    2 PS417_04835 hemolysin D -0.20
    3 PS417_03075 hypothetical protein -0.18
    4 PS417_16455 hypothetical protein -0.18
    5 PS417_21400 TetR family transcriptional regulator -0.18
    6 PS417_12665 hypothetical protein -0.18
    7 PS417_20575 ATP-dependent helicase HrpA -0.18
    8 PS417_21085 GntR family transcriptional regulator -0.18
    9 PS417_12785 hypothetical protein -0.17
    10 PS417_20210 membrane protein -0.17
    11 PS417_22870 lipoprotein -0.16
    12 PS417_14855 gluconolactonase -0.16
    13 PS417_23015 NGG1p interacting factor 3 protein, NIF3 -0.16
    14 PS417_02045 3-oxoacyl-ACP synthase -0.16
    15 PS417_12945 sulfonate ABC transporter ATP-binding protein -0.16
    16 PS417_19595 3-methylcrotonyl-CoA carboxylase -0.16
    17 PS417_03895 methyltransferase -0.16
    18 PS417_10445 LysR family transcriptional regulator -0.16
    19 PS417_19635 lipid kinase -0.16
    20 PS417_25115 lipopolysaccharide biosynthesis protein -0.15

    Or look for positive cofitness