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  • Negative cofitness for PS417_03490 from Pseudomonas simiae WCS417

    type III secretion system protein SsaR
    SEED: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components)
    KEGG: type III secretion protein SctR

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_03260 5S ribosomal RNA -0.22
    2 PS417_16275 hypothetical protein -0.21
    3 PS417_14360 hypothetical protein -0.20
    4 PS417_03780 general secretion pathway protein GspH -0.19
    5 PS417_23915 pantoate--beta-alanine ligase -0.18
    6 PS417_20110 membrane protein -0.18
    7 PS417_12535 nitrilase -0.18
    8 PS417_22575 exonuclease I -0.18
    9 PS417_07555 ABC transporter ATPase -0.17
    10 PS417_18710 hypothetical protein -0.17
    11 PS417_16555 cupin -0.17
    12 PS417_22270 hypothetical protein -0.17
    13 PS417_15135 hypothetical protein -0.16
    14 PS417_21250 hypothetical protein -0.16
    15 PS417_06585 hypothetical protein -0.16
    16 PS417_05900 TetR family transcriptional regulator -0.16
    17 PS417_02975 3-dehydroquinate dehydratase -0.16
    18 PS417_15830 GNAT family acetyltransferase -0.16
    19 PS417_01115 serine acetyltransferase -0.16
    20 PS417_08425 acetyltransferase -0.16

    Or look for positive cofitness